PUBLICATIONS
Stanhope BA, Jaggard JB, Gratton M, Keene AC (In Review). Sleep regulates the glial engulfment receptor Draper to promote Wallerian degeneration. Current Biology.
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Mack KL, Jaggard JB, Persons JL, Passow CN, Stanhope BA, Ferrufino E, Tsuchiya D, Smith SE, Slaughter B, Kono TJY, Kowalko J, Rohner N, Keene AC, McGaugh SE (In Review). Convergent dysregulation of the circadian clock in cavefish populations.
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Stahl BA, Peuß R, McDole B, Kenzior A, Jaggard JB, Gaudenz K, Krishnan J, McGaugh SE, Duboue ER, Keene AC, Rohner N. (2019) Stable transgenesis in Astyanax mexicanus using the Tol2 transposase system. Developmental Dynamics. Available online early. doi: 10.1002/dvdy.32.
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Stahl BA, Jaggard JB, Chin JSR, Kowalko JE, Keene AC, Duboue ER. (2019) Manipulation of gene function in Mexican cavefish. JOVE. (146), e59093
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Passow CN, Kono TJY, Stahl BA, Jaggard JB, Keene AC, McGaugh SE. (2019) RNAlater and flash freezing storage methods nonrandomly influence observed gene expression in RNAseq experiments. Molecular Ecology Resources. 19(2):456-464
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Stahl BA, Peco E, Davla S, Murakami K, Caicedo Moreno NA, van Meyel DJ, Keene AC. (2018). The taurine transporter Eaat2 functions in ensheathing glia to modulate sleep and metabolic rate. Current Biology. 28(22):3700-3708.e4
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Stahl BA, Sears CR, Ma L, Perkins M, Gross JB. (2018) Pmela and Tyrp1b Contribute to Melanophore Variation in Mexican Cavefish. In: Pontarotti P. (eds) Origin and Evolution of Biodiversity. Springer, Cham.
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Chin JSR, Gassant CE, Amaral, Lloyd E, Stahl BA, Jaggard JB, Keene AC, Duboué ER. (2018) Convergence on reduced stress behavior in the Mexican blind cavefish. Developmental Biology. 441(2):319-327
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Lloyd E, Olive C, Stahl BA, Jaggard JB, Amaral P, Duboué ER, Keene AC. (2018) Evolutionary shift towards lateral line dependent prey capture behavior in the blind Mexican cavefish. Developmental Biology. 441(2):328-337.
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Jaggard JB, Stahl BA, Lloyd E, Prober DA, Duboue ER, Keene AC. (2018). Hypocretin underlies the evolution of sleep loss in the Mexican cavefish. eLife. pii: e32637.
Stahl BA and Keene AC. (2017) To rebound or not to rebound. eLife. pii: e31646.
Gross JB, Weagley JA, Stahl BA, Ma L, Espinasa L, McGaugh SE. (2017) A local duplication of the Melanocortin receptor 1 locus in Astyanax. Genome. 24:1-12.
Stahl BA and Gross JB. (2017) A comparative transcriptomic analysis of development in two Astyanax cavefish populations. JEZ Part B: Molecular and Developmental Evolution.
328(6):515-532.
Stahl BA, Slocumb ME, Chaitin H, DiAngelo JR, Keene AC. (2017) Sleep-dependent modulation of metabolic rate in Drosophila. SLEEP. 1:40(8).
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Jaggard JB, Robinson BG, Stahl BA, Oh I, Masek P, Yoshizawa M, Keene AC. (2017). The lateral
line confers evolutionarily derived sleep loss in the Mexican cavefish. Journal of Experimental Biology. 220(2):284-293.
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Murakami K, Yurgel ME, Stahl BA, Masek P, Mehta A, Heidker R, Bollinger W, Gingras RW, Kim YJ, Ja W, Suter B, DiAngelo JR, Keene AC. (2016) Translin is required for metabolic regulation of sleep. Current Biology. 26(7):972-980.
Gross JB, Stahl BA, Powers AK, Carlson BM. (2016) Natural bone fragmentation in the blind cave-dwelling fish, Astyanax mexicanus: Candidate gene identification through integrative comparative genomics. Evolution & Development. 18(1):7-18. doi: 10.1111/ede.12131
Stahl BA and Gross JB. (2015) Alterations in Mc1r gene expression are associated with regressive pigmentation phenotypes in Astyanax cavefish. Development, Genes, and Evolution. DOI 10.1007/s00427-015-0517-0
Stahl BA, Gross JB, Speiser DI, Oakley TH, Patel NH, Gould DB, Protas ME. (2015) A transcriptomic analysis of cave, surface and hybrid isopod crustaceans of the species Asellus aquaticus. PLoS ONE. 10(10): e0140484.
McGaugh SE, Gross JB, Aken B, Blin M, Borowsky R, Chalopin D, Hinaux H, Jeffery W, Keene A, Ma L, Minx P, Murphy D, O’Quin KE, Rétaux S, Rohner N, Searle SMJ, Stahl BA, Tabin C, Volff JN, Yoshizawa M, Warren WC. (2014) The cavefish genome reveals candidate genes for eye loss. Nature Communications 5:5307.
Gross JB, Furterer A, Carlson BM, Stahl BA. (2013) An integrated transcriptome-wide analysis of cave and surface dwelling Astyanax mexicanus. PLoS ONE. 8(2): e55659.